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Obsidian is a free app with no limitations, and Matter is also free during its beta period, which has been going on for upwards of a year as of this writing. If this sounds appealing to you, I highly suggest trying out both apps.

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Your system also needs to be flexible enough to handle anything from a short article you want to read later when you have some free time to a YouTube video or research material for a big project you’re researching.
nvALT - BrettTerpstra.com brettterpstra.com

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nvALT 2 is a fork of the original Notational Velocity with some additional features and interface modifications, including MultiMarkdown functionality.

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nvALT is a lightweight program for capturing created by Brett Terpstra.

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While I still think DEVONThink’s power outpaces my needs, the app has worked exceedingly well for storing all sorts of information, quickly unearthing that information, and finding connections between files I never knew existed.
But DEVONThink on the Mac has jumped aboard the same backlinking train as Obsidian, Roam, Craft, and other heralded note-taking and research apps.

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If you're serious about working on iOS, DEVONthink To Go is your document repository when you're not at your Mac.

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Articles I save always as Markdown to my reference database for later reference. The DEVONthink capture feature is one of the most useful features I know. It grabs the article, cleans it from advertising and layout elements, and converts it Markdown, including all links.

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Is it possible to highlight online text and clip it to DEVONthink?

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Our browser extensions for Firefox and Chrome as well as the Clip to DEVONthink bookmarklet (all browsers including Safari) continue to work just fine.
Safari 13 brings a number of great security enhancements but also one that directly affects you if you’re a DEVONthink user: It no longer supports traditional browser extensions including Ghostery or our old Clip to DEVONthink extension.
DEVONtechnologies | Researchers www.devontechnologies.com

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Use the right tool for your research: DEVONagent Pro.
Use DEVONagent Pro to capture articles, pictures, or links with a single click.
DEVONsphere Express finds more data related to what you work on.
In your study or the lab, use DEVONthink to take notes on whatever you find out or new ideas that come to mind.
Capture interesting stuff directly into DEVONthink, always with a link to the original source.
Add anything digital to the GTD®-like inbox of DEVONthink without interrupting your flow.
Review your notes and articles in DEVONthink without opening additional apps.

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Craft includes excellent sharing options to other formats: a nicely formatted email, PDF, Microsoft Word, Markdown, and Textbundle, which allows a complete export of your database to other apps like Bear or Obsidian. In addition, notes can be shared between apps like Ulysses, Day One, DevonThink, and Things.
I use Craft as a Zettelkasten-style note-taking system fed by a healthy reading habit.
The steps to export your Craft data really couldn’t be more straightforward. Select all your notes and use the export to Markdown function. This creates a nested folder of all your notes in Markdown text format alongside images, PDFs, or other files stored in Craft. Next, open the folder as a vault in Obsidian. That’s it.

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why I think they’re both suited to different types of note-takers

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Raycast is a blazingly fast, totally extendable launcher. It lets you complete tasks, calculate, share common links, and much more.
reviews - MacStories www.macstories.net

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Solidly developer-focused in scope, the app serves files from a local directory to an automatically generated URL, making these files available to any device on your local network.
reviews - MacStories www.macstories.net

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When you type two left square brackets, iA Writer will use the next text you type as a search query to see if you have a matching document in the app’s Library.
iA Writer has long been one of the premier text editors on Apple’s platforms.

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PDF Expert is delightfully easy to use, offers the fastest PDF app reading experience, works with many syncing services, and has the most robust toolset available on the iPad. In most cases, PDF Expert’s free toolset outmatches other for-pay options.
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